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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs13198809 chr6:28323702 G/A ZFP57 chr6:29640169-29648887:- 0.75 6.3 8.01E-10 Box Plot
BLCA rs13199772 chr6:27834085 A/G ZFP57 chr6:29640169-29648887:- 0.65 6.23 1.25E-9 Box Plot
BLCA rs13199906 chr6:27834139 C/G ZFP57 chr6:29640169-29648887:- 0.65 6.23 1.25E-9 Box Plot
BLCA rs13200214 chr6:28017250 C/T BTN3A2 chr6:26365387-26378548:+ -0.59 -6.44 3.67E-10 Box Plot
BLCA rs13200214 chr6:28017250 C/T ZFP57 chr6:29640169-29648887:- 0.68 6.11 2.46E-9 Box Plot
BLCA rs13201308 chr6:28130089 C/T ZFP57 chr6:29640169-29648887:- 0.74 6.2 1.44E-9 Box Plot
BLCA rs13201681 chr6:28394680 C/T ZFP57 chr6:29640169-29648887:- 0.76 6.98 1.28E-11 Box Plot
BLCA rs13202114 chr6:103127729 A/G ATG5 chr6:106493298-106773666:- 0.79 6.82 3.55E-11 Box Plot
BLCA rs13202114 chr6:103127729 A/G C6orf203 chr6:107349417-107372546:+ 0.69 6.44 3.6E-10 Box Plot
BLCA rs13202114 chr6:103127729 A/G CDC40 chr6:110501344-110575478:+ 0.68 6.58 1.59E-10 Box Plot
BLCA rs13202114 chr6:103127729 A/G GOPC chr6:117881432-117923705:- 0.64 6.52 2.29E-10 Box Plot
BLCA rs13202114 chr6:103127729 A/G NUS1 chr6:117996665-118031803:+ 0.77 7.3 1.72E-12 Box Plot
BLCA rs13202114 chr6:103127729 A/G SEC63 chr6:108188960-108279393:- 0.71 6.37 5.45E-10 Box Plot
BLCA rs13202114 chr6:103127729 A/G SFRS18 chr6:99846535-99873207:- 0.45 6.25 1.07E-9 Box Plot
BLCA rs13202114 chr6:103127729 A/G SYNCRIP chr6:86317503-86353510:- 0.68 6.94 1.73E-11 Box Plot